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March 18, 2025
Last Updated : September 9, 2025

Tax Considerations When Buying and Selling Commercial Property

Buying and selling commercial real estate can be an excellent way to build wealth, but if you’re not careful, taxes can eat into your profits. Understanding commercial property sale tax considerations is crucial for maximizing returns and minimizing liabilities.

In this article, we’ll cover the key tax implications you need to know when buying and selling commercial property, including:

  • Capital gains tax and how it applies to commercial sales
  • Depreciation recapture and how it impacts your tax bill
  • Transaction tax strategies, including 1031 exchanges to defer taxes

Tax Implications of Buying Commercial Real Estate

Before purchasing commercial property, it’s essential to understand the commercial real estate tax implications that could affect your investment.

Depreciation & Cost Segregation

  • The IRS allows you to depreciate commercial property over 39 years, providing tax deductions that offset rental income.
  • A cost segregation study accelerates depreciation by classifying certain components (e.g., HVAC, lighting, landscaping) as shorter-life assets, reducing taxable income faster.

Mortgage Interest Deduction

  • If you finance your commercial real estate purchase, mortgage interest is fully deductible, reducing taxable income.
  • However, interest deductions on high-leverage deals may be subject to IRS limitations under the Business Interest Expense Limitation (Section 163(j)).

Closing Costs & Tax Deductions

  • Expenses like loan fees, legal fees, and due diligence costs aren’t immediately deductible but may be amortized over time.
  • Property taxes and insurance paid at closing are typically deductible in the first year.

Sales Tax & Transfer Taxes

  • Some states impose real estate transfer taxes when buying property, which may be deductible as a business expense.
  • If purchasing tenant-occupied property, be aware of potential sales tax on rental income, depending on your state’s tax laws.

Tax Considerations When Selling Commercial Property

Selling a commercial property comes with significant tax implications. Understanding them ahead of time can help you structure your sale to minimize your tax burden.

Capital Gains Tax on Commercial Property Sales

When you sell a commercial property for a profit, the capital gains tax applies.

  • Short-term capital gains: If you’ve owned the property for less than a year, your gains are taxed as ordinary income (up to 37% in 2024).
  • Long-term capital gains: If you’ve held the property for more than a year, your profits are taxed at 15% or 20%, depending on your income level.

Depreciation Recapture Tax

One major tax hit sellers often overlook is depreciation recapture.

  • Since you likely deducted depreciation expenses while owning the property, the IRS requires you to pay back a portion of those tax savings when you sell.
  • Depreciation recapture is taxed at 25%, which is often higher than the long-term capital gains rate.

Example:

If you depreciated $200,000 over time, that portion of your sale will be taxed at 25% ($50,000 in taxes owed)—on top of any capital gains tax.

Net Investment Income Tax (NIIT)

  • If your adjusted gross income (AGI) exceeds $200,000 (individual) or $250,000 (married filing jointly), you may owe an additional 3.8% tax on net investment income, including capital gains from real estate sales.

1031 Exchange: Deferring Capital Gains Taxes

A 1031 exchange allows investors to defer capital gains tax by reinvesting proceeds into a “like-kind” commercial property.

  • The replacement property must be identified within 45 days and purchased within 180 days.
  • To fully defer taxes, the new property must be of equal or greater value than the one sold.
  • A qualified intermediary must handle the exchange—you can’t take possession of the funds.

Example:

You sell an office building for $1 million with a $300,000 taxable gain. Instead of paying $60,000+ in capital gains taxes, you reinvest the full amount into another commercial property, deferring all taxes.

Installment Sales: Spreading Out Tax Liability

Rather than receiving full payment upfront, a seller can finance the sale and receive payments over time.

  • This spreads the capital gains tax liability over multiple years, potentially keeping you in a lower tax bracket each year.
  • Works best when selling to a trusted buyer who will make payments reliably.

Opportunity Zone Investments

If you have taxable capital gains, investing in a Qualified Opportunity Zone (QOZ) may be beneficial. Review the new rules under the OBBBA.

Final Thoughts

Buying and selling commercial real estate involves complex tax considerations that can significantly impact your profits.

  • Buyers should leverage depreciation, mortgage interest deductions, and cost segregation to maximize tax benefits.
  • Sellers should plan for capital gains tax, depreciation recapture, and explore strategies like 1031 exchanges or installment sales to reduce tax liability.
  • Investors can use Opportunity Zones or other tax-advantaged investments to further optimize tax outcomes.

The key to maximizing your returns while minimizing taxes is strategic tax planning. Work with a tax professional or real estate CPA to ensure you’re using all available strategies to your advantage.

 Click to Access the 2025 Tax Changes Tracker

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